Outputs – Institute of Aquaculture | University of Stirling

Article

Phylogenetic analysis of the caspase family in bivalves: implications for programmed cell death, immune response and development

Vogeler S, Carboni S, Li X & Joyce A (2021) Phylogenetic analysis of the caspase family in bivalves: implications for programmed cell death, immune response and development. BMC Genomics, 22 (1), Art. No.: 80. https://doi.org/10.1186/s12864-021-07380-0

Article

Geographical distribution of Gyrodactylus salaris Malmberg, 1957 (Monogenea, Gyrodactylidae)

Paladini G, Shinn AP, Taylor NGH, Bron JE & Hansen H (2021) Geographical distribution of Gyrodactylus salaris Malmberg, 1957 (Monogenea, Gyrodactylidae). Parasites and Vectors, 14, Art. No.: 34. https://doi.org/10.1186/s13071-020-04504-5

Article

Genome-wide analysis clarifies the population genetic structure of wild gilthead sea bream (Sparus aurata)

Maroso F, Gkagkavouzis K, De Innocentiis S, Hillen J, do Prado F, Karaiskou N, Taggart JB, Carr A, Nielsen E, Triantafyllidis A & Bargelloni L (2021) Genome-wide analysis clarifies the population genetic structure of wild gilthead sea bream (Sparus aurata). PLoS One, 16 (1), Art. No.: e0236230. https://doi.org/10.1371/journal.pone.0236230

Article

Pharaoh Cuttlefish, Sepia pharaonis, Genome Reveals Unique Reflectin Camouflage Gene Set

Song W, Li R, Zhao Y, Migaud H, Wang C & Bekaert M (2021) Pharaoh Cuttlefish, Sepia pharaonis, Genome Reveals Unique Reflectin Camouflage Gene Set. Frontiers in Marine Science, 8, Art. No.: 639670. https://doi.org/10.3389/fmars.2021.639670

Article

Linking Scales of Life-History Variation With Population Structure in Atlantic Cod

Wright PJ, Doyle A, Taggart JB & Davie A (2021) Linking Scales of Life-History Variation With Population Structure in Atlantic Cod. Frontiers in Marine Science, 8, Art. No.: 630515. https://doi.org/10.3389/fmars.2021.630515

Article

Scenarios for global aquaculture and its role in human nutrition

Gephart JA, Golden CD, Asche F, Belton B, Brugere C, Froehlich HE, Fry JP, Halpern BS, Hicks CC, Jones RC, Klinger DH, Little DC, McCauley DJ, Thilsted SH, Troell M & Allison EH (2021) Scenarios for global aquaculture and its role in human nutrition. Reviews in Fisheries Science and Aquaculture, 29 (1), pp. 122-138. https://doi.org/10.1080/23308249.2020.1782342

Article

Analysis across diverse fish species highlights no conserved transcriptome signature for proactive behaviour

Rey S, Jin X, Damsgård B, Bégout M & Mackenzie S (2021) Analysis across diverse fish species highlights no conserved transcriptome signature for proactive behaviour. BMC Genomics, 22 (1), Art. No.: 33. https://doi.org/10.1186/s12864-020-07317-z

Authored Book

Resilience in the English Small-Scale Fishery: Small Fry but Big Issue

Korda R, Gray T & Stead SM (2021) Resilience in the English Small-Scale Fishery: Small Fry but Big Issue. Cham, Switzerland: Springer. https://doi.org/10.1007/978-3-030-54245-0

Article

Dietary soybean oil aggravates the adverse effects of low salinity on intestinal health in juvenile mud crab Scylla paramamosain

Luo J, Zhang Y, Zhou Q, Betancor MB, Tocher DR, Lu J, Yuan Y, Zhu T, Jiao L, Wang X, Zhao M, Hu X & Jin M (2021) Dietary soybean oil aggravates the adverse effects of low salinity on intestinal health in juvenile mud crab Scylla paramamosain. Ecotoxicology and Environmental Safety, 213, Art. No.: 112004. https://doi.org/10.1016/j.ecoenv.2021.112004

Article

Emerging COVID-19 impacts, responses, and lessons for building resilience in the seafood system

Love DC, Allison EH, Asche F, Belton B, Cottrell RS, Froehlich HE, Gephart JA, Hicks CC, Little DC, Nussbaumer EM, Pinto da Silva P, Poulain F, Rubio A, Stoll JS & Tlusty MF (2021) Emerging COVID-19 impacts, responses, and lessons for building resilience in the seafood system. Global Food Security, 28, Art. No.: 100494. https://doi.org/10.1016/j.gfs.2021.100494

Article

Flash Flood simulation and valve behavior of Mytilus galloprovincialis measured with Hall sensors

Addis P, Angioni A, Pasquini V, Giglioli A, Andreotti V, Carboni S & Secci M (2021) Flash Flood simulation and valve behavior of Mytilus galloprovincialis measured with Hall sensors. Integrative Zoology, 16 (2), pp. 138-148. https://doi.org/10.1111/1749-4877.12471

Article

A temperature shift during embryogenesis impacts prevalence of deformity in diploid and triploid Atlantic salmon (Salmo salar L.)

Clarkson M, Taylor JF, McStay E, Palmer MJ, Clokie BGJ & Migaud H (2021) A temperature shift during embryogenesis impacts prevalence of deformity in diploid and triploid Atlantic salmon (Salmo salar L.). Aquaculture Research, 52 (3), pp. 906-923. https://doi.org/10.1111/are.14945

Article

Deformities prevalence in farmed ballan wrasse (Labrus bergylta) in relation to hatchery origin and life stage

Cavrois-Rogacki T, Drabikova L, Migaud H & Davie A (2021) Deformities prevalence in farmed ballan wrasse (Labrus bergylta) in relation to hatchery origin and life stage. Aquaculture, 533, Art. No.: 736212. https://doi.org/10.1016/j.aquaculture.2020.736212

Article

Investigation of deltamethrin resistance in salmon lice (Lepeophtheirus salmonis) provides no evidence for roles of mutations in voltage-gated sodium channels

Tschesche C, Bekaert M, Bassett DI, Mitchell C, North B, Boyd S, Carmona‐Antoñanzas G, Bron JE & Sturm A (2021) Investigation of deltamethrin resistance in salmon lice (Lepeophtheirus salmonis) provides no evidence for roles of mutations in voltage-gated sodium channels. Pest Management Science, 77 (2), pp. 1052-1060. https://doi.org/10.1002/ps.6120

Article

Increased robustness of postlarvae and juveniles from non-ablated Pacific whiteleg shrimp, Penaeus vannamei, broodstock post-challenged with pathogenic isolates of Vibrio parahaemolyticus (VpAHPND) and white spot disease (WSD)

Zacarias S, Fegan D, Wangsoontorn S, Yamuen N, Limakom T, Carboni S, Davie A, Metselaar M, Little DC & Shinn AP (2021) Increased robustness of postlarvae and juveniles from non-ablated Pacific whiteleg shrimp, Penaeus vannamei, broodstock post-challenged with pathogenic isolates of Vibrio parahaemolyticus (VpAHPND) and white spot disease (WSD). Aquaculture, 532, Art. No.: 736033. https://doi.org/10.1016/j.aquaculture.2020.736033

Article

Dietary DHA/EPA ratio affects growth, tissue fatty acid profiles and expression of genes involved in lipid metabolism in mud crab Scylla paramamosain supplied with appropriate n-3 LC-PUFA at two lipid levels

Wang X, Jin M, Cheng X, Hu X, Zhao M, Yuan Y, Sun P, Jiao L, Betancor M, Tocher D & Zhou Q (2021) Dietary DHA/EPA ratio affects growth, tissue fatty acid profiles and expression of genes involved in lipid metabolism in mud crab Scylla paramamosain supplied with appropriate n-3 LC-PUFA at two lipid levels. Aquaculture, 532, Art. No.: 736028. https://doi.org/10.1016/j.aquaculture.2020.736028

Article

Illuminating the planktonic stages of salmon lice: A unique fluorescence signal for rapid identification of a rare copepod in zooplankton assemblages

Thompson CRS, Bron JE, Bui S, Dalvin S, Fordyce MJ, Furmanek T, Á Norði G & Skern-Mauritzen R (2021) Illuminating the planktonic stages of salmon lice: A unique fluorescence signal for rapid identification of a rare copepod in zooplankton assemblages. Journal of Fish Diseases. https://doi.org/10.1111/jfd.13345

Article

Insights and recommendations for involving young people in decision making for the marine environment

Devenport E, Brooker E, Brooker A & Leakey C (2021) Insights and recommendations for involving young people in decision making for the marine environment. Marine Policy, 124, Art. No.: 104312. https://doi.org/10.1016/j.marpol.2020.104312

Article

Transcriptomic and physiological analyses of hepatopancreas reveal the key metabolic changes in response to dietary copper level in Pacific white shrimp Litopenaeus vannamei

Shi B, Yuan Y, Jin M, Betancor MB, Tocher DR, Jiao L, Song D & Zhou Q (2021) Transcriptomic and physiological analyses of hepatopancreas reveal the key metabolic changes in response to dietary copper level in Pacific white shrimp Litopenaeus vannamei. Aquaculture, 532, Art. No.: 736060. https://doi.org/10.1016/j.aquaculture.2020.736060

Article

Community Parameters and Genome-Wide RAD-Seq Loci of Ceratothoa oestroides Imply Its Transfer between Farmed European Sea Bass and Wild Farm-Aggregating Fish

Mladineo I, Hrabar J, Trumbić Ž, Manousaki T, Tsakogiannis A, Taggart JB & Tsigenopoulos CS (2021) Community Parameters and Genome-Wide RAD-Seq Loci of Ceratothoa oestroides Imply Its Transfer between Farmed European Sea Bass and Wild Farm-Aggregating Fish. Pathogens, 10 (2), Art. No.: 100. https://doi.org/10.3390/pathogens10020100

Article

Evidence of two XX/XY sex-determining loci in the Stirling stock of Nile tilapia (Oreochromis niloticus)

Taslima K, Khan MGQ, McAndrew BJ & Penman DJ (2021) Evidence of two XX/XY sex-determining loci in the Stirling stock of Nile tilapia (Oreochromis niloticus). Aquaculture, 532, Art. No.: 735995. https://doi.org/10.1016/j.aquaculture.2020.735995

Article

Daily rhythms in the morphometric parameters of hepatocytes and intestine of the European sea bass (Dicentrarchus labrax): influence of feeding time and hepatic zonation

Rodriguez-Carretero I, Betancor MB, López-Jiménez JA, Esteban MA, Sánchez-Vázquez FJ & López-Olmeda JF (2021) Daily rhythms in the morphometric parameters of hepatocytes and intestine of the European sea bass (Dicentrarchus labrax): influence of feeding time and hepatic zonation. Journal of Comparative Physiology B. https://doi.org/10.1007/s00360-020-01334-w

Article

Requirement for omega-3 long-chain polyunsaturated fatty acids by Atlantic salmon is relative to the dietary lipid level

Huyben D, Grobler T, Matthew C, Bou M, Ruyter B & Glencross B (2021) Requirement for omega-3 long-chain polyunsaturated fatty acids by Atlantic salmon is relative to the dietary lipid level. Aquaculture, 531, Art. No.: 735805. https://doi.org/10.1016/j.aquaculture.2020.735805

Article

Polyunsaturated fatty acid metabolism in three fish species with different trophic level

Galindo A, Garrido D, Monroig O, Perez JA, Betancor M, Acosta NG, Kabeya N, Marrero M, Bolanos A & Rodriguez C (2021) Polyunsaturated fatty acid metabolism in three fish species with different trophic level. Aquaculture, 530, Art. No.: 735761. https://doi.org/10.1016/j.aquaculture.2020.735761

Article

Oil from transgenic Camelina sativa as a source of EPA and DHA in feed for European sea bass (Dicentrarchus labrax L.)

Betancor M, MacEwan A, Sprague M, Gong X, Montero D, Han L, Napier J, Norambuena F, Izquierdo M & Tocher D (2021) Oil from transgenic Camelina sativa as a source of EPA and DHA in feed for European sea bass (Dicentrarchus labrax L.). Aquaculture, 530, Art. No.: 735759. https://doi.org/10.1016/j.aquaculture.2020.735759

Article

Bacterial Communities of Ballan Wrasse (Labrus bergylta) Eggs at a Commercial Marine Hatchery

Bone A, Bekaert M, Papadopoulou A, McMillan S, Adams A, Davie A & Desbois AP (2021) Bacterial Communities of Ballan Wrasse (Labrus bergylta) Eggs at a Commercial Marine Hatchery. Current Microbiology, 78 (1), pp. 114-124. https://doi.org/10.1007/s00284-020-02286-8

Article

Aerobic swimming in intensive finfish aquaculture: applications for production, mitigation and selection

McKenzie DJ, Palstra AP, Planas J, MacKenzie S, Bégout M, Thorarensen H, Vandeputte M, Mes D, Rey S, De Boeck G, Domenici P & Skov PV (2021) Aerobic swimming in intensive finfish aquaculture: applications for production, mitigation and selection. Reviews in Aquaculture, 13 (1), pp. 138-155. https://doi.org/10.1111/raq.12467

Article

Implementing aquaculture technology and innovation platforms in Asia

Bush SR, Pauwelussen A, Badia P, Kruk S, Little D, Luong LT, Newton R, Nhan DT, Rahman MM, Sorgeloos P & Sung YY (2021) Implementing aquaculture technology and innovation platforms in Asia. Aquaculture, 530, Art. No.: 735822. https://doi.org/10.1016/j.aquaculture.2020.735822

Article

Humane slaughter of African sharptooth catfish (Clarias gariepinus): Effects of various stunning methods on brain function

Brijs J, Sundell E, Hjelmstedt P, Berg C, Senčić I, Sandblom E, Axelsson M, Lines J, Bouwsema J, Ellis M, Saxer A & Gräns A (2021) Humane slaughter of African sharptooth catfish (Clarias gariepinus): Effects of various stunning methods on brain function. Aquaculture, 531, Art. No.: 735887. https://doi.org/10.1016/j.aquaculture.2020.735887

Article

Effects of different dietary oil sources on growth performance, antioxidant capacity and lipid deposition of juvenile golden pompano Trachinotus ovatus

Guo H, Chen C, Yan X, Li Y, Wen X, You C, Monroig Ó, Tocher DR & Wang S (2021) Effects of different dietary oil sources on growth performance, antioxidant capacity and lipid deposition of juvenile golden pompano Trachinotus ovatus. Aquaculture, 530, Art. No.: 735923. https://doi.org/10.1016/j.aquaculture.2020.735923

Article

Cloning and characterisation of NMDA receptors in the Pacific oyster, Crassostrea gigas (Thunberg, 1793) in relation to metamorphosis and catecholamine synthesis

Vogeler S, Carboni S, Li X, Ireland JH, Miller-Ezzy P & Joyce A (2021) Cloning and characterisation of NMDA receptors in the Pacific oyster, Crassostrea gigas (Thunberg, 1793) in relation to metamorphosis and catecholamine synthesis. Developmental Biology, 469, pp. 144-159. https://doi.org/10.1016/j.ydbio.2020.10.008

Article

Development of diagnostic assays for differentiation of atypical Aeromonas salmonicida vapA type V and type VI in ballan wrasse (Labrus bergylta, Ascanius)

Papadopoulou A, Davie A, Monaghan SJ, Migaud H & Adams A (2021) Development of diagnostic assays for differentiation of atypical Aeromonas salmonicida vapA type V and type VI in ballan wrasse (Labrus bergylta, Ascanius). Journal of Fish Diseases. https://doi.org/10.1111/jfd.13334

Letter

Managing aquaculture in multi-use freshwater bodies: the case of Jatiluhur reservoir

Taskov D, Telfer T, Bengtson D, Rice MA, Little D & Murray F (2021) Managing aquaculture in multi-use freshwater bodies: the case of Jatiluhur reservoir. Environmental Research Letters. https://doi.org/10.1088/1748-9326/abe009

Article

Intensification, regulation and diversification; the changing face of inland aquaculture in China

Newton R, Zhang W, Xian Z, McAdam B & Little DC (2021) Intensification, regulation and diversification; the changing face of inland aquaculture in China. AMBIO: A Journal of the Human Environment.

Article

Liver colour scoring index, carotenoids and lipid content assessment as a proxy for lumpfish (Cyclopterus lumpus L.) health and welfare condition

Eliasen K, Patursson EJ, McAdam BJ, Pino E, Morro B, Betancor M, Baily J & Rey S (2020) Liver colour scoring index, carotenoids and lipid content assessment as a proxy for lumpfish (Cyclopterus lumpus L.) health and welfare condition. Scientific Reports, 10, Art. No.: 8927. https://doi.org/10.1038/s41598-020-65535-7

Article

Optimising efficacy of antibiotics against systemic infection by varying dosage quantities and times

Hoyle A, Cairns D, Paterson I, McMillan S, Ochoa G & Desbois AP (2020) Optimising efficacy of antibiotics against systemic infection by varying dosage quantities and times. PLoS Computational Biology, 16 (8), Art. No.: e1008037. https://doi.org/10.1371/journal.pcbi.1008037

Article

Transcriptomic comparison of communally reared wild, domesticated and hybrid Atlantic salmon fry under stress and control conditions

Bicskei B, Taggart JB, Bron JE & Glover KA (2020) Transcriptomic comparison of communally reared wild, domesticated and hybrid Atlantic salmon fry under stress and control conditions. BMC Genetics, 21, Art. No.: 57. https://doi.org/10.1186/s12863-020-00858-y

Article

Seasonal effects on growth and product quality in Atlantic salmon fed diets containing terrestrial oils as assessed by a long-term, on-farm growth trial

Mock TS, Francis DS, Jago MK, Miles PC, Glencross BD, Smullen RP, Keast RSJ & Turchini GM (2020) Seasonal effects on growth and product quality in Atlantic salmon fed diets containing terrestrial oils as assessed by a long-term, on-farm growth trial. Aquaculture Nutrition. https://doi.org/10.1111/anu.13200

Article

Novel atypical Aeromonas salmonicida bath challenge model for juvenile ballan wrasse (Labrus bergylta, Ascanius)

Papadopoulou A, Garvey K, Hill T, Ramirez‐Paredes JG, Monaghan SJ, Baily JL, Davie A, Katsiadaki I, Verner‐Jeffreys D, Wallis T, Migaud H & Adams A (2020) Novel atypical Aeromonas salmonicida bath challenge model for juvenile ballan wrasse (Labrus bergylta, Ascanius). Journal of Fish Diseases. https://doi.org/10.1111/jfd.13312

Article

A commercial autogenous injection vaccine protects ballan wrasse (Labrus bergylta, ascanius) against aeromonas salmonicida vapA type V

Ramirez-Paredes JG, Verner-Jeffreys D, Papadopoulou A, Monaghan SJ, Smith L, Haydon D, Wallis TS, Davie A, Adams A & Migaud H (2020) A commercial autogenous injection vaccine protects ballan wrasse (Labrus bergylta, ascanius) against aeromonas salmonicida vapA type V. Fish and Shellfish Immunology, 107 (Part A), pp. 43-53. https://doi.org/10.1016/j.fsi.2020.09.040

Article

Identification of proteins from the secretory/excretory products (SEPs) of the branchiuran ectoparasite Argulus foliaceus (Linnaeus, 1758) reveals unique secreted proteins amongst haematophagous ecdysozoa

AmbuAli A, Monaghan SJ, McLean K, Inglis NF, Bekaert M, Wehner S & Bron JE (2020) Identification of proteins from the secretory/excretory products (SEPs) of the branchiuran ectoparasite Argulus foliaceus (Linnaeus, 1758) reveals unique secreted proteins amongst haematophagous ecdysozoa. Parasites and Vectors, 13 (1), Art. No.: 88. https://doi.org/10.1186/s13071-020-3964-z

Article

Tick-borne encephalitis virus (TBEV) prevalence in field-collected ticks (Ixodes ricinus) and phylogenetic, structural and virulence analysis in a TBE high-risk endemic area in southwestern Germany

Ott D, Ulrich K, Ginsbach P, Öhme R, Bock-Hensley O, Falk U, Teinert M & Lenhard T (2020) Tick-borne encephalitis virus (TBEV) prevalence in field-collected ticks (Ixodes ricinus) and phylogenetic, structural and virulence analysis in a TBE high-risk endemic area in southwestern Germany. Parasites and Vectors, 13, Art. No.: 303. https://doi.org/10.1186/s13071-020-04146-7

Article

Chromosome aberrations in pressure-induced triploid Atlantic salmon

Glover KA, Harvey AC, Hansen TJ, Fjelldal PG, Besnier FN, Bos JB, Ayllon F, Taggart JB & Solberg MF (2020) Chromosome aberrations in pressure-induced triploid Atlantic salmon. BMC Genetics, 21, Art. No.: 59. https://doi.org/10.1186/s12863-020-00864-0

Article

GnRHa implants and size pairing effects on plasma and cephalic secretion sex steroids in Arapaima gigas

Torati LS, Taylor JF, Mesquita PEC & Migaud H (2020) GnRHa implants and size pairing effects on plasma and cephalic secretion sex steroids in Arapaima gigas. General and Comparative Endocrinology, 299, Art. No.: 113614. https://doi.org/10.1016/j.ygcen.2020.113614

Article

Integrating insect frass biofertilisers into sustainable peri-urban agro-food systems

Quilliam R, Nuku-Adeku C, Maquart P, Little D, Newton R & Murray F (2020) Integrating insect frass biofertilisers into sustainable peri-urban agro-food systems. Journal of Insects as Food and Feed, 6 (3), pp. 315 - 322. https://doi.org/10.3920/JIFF2019.0049

Article

Atypical Aeromonas salmonicida vapA type V and Vibrio spp. are predominant bacteria recovered from ballan wrasse Labrus bergylta in Scotland

Papadopoulou A, Wallis T, Ramirez-Paredes JG, Monaghan SJ, Davie A, Migaud H & Adams A (2020) Atypical Aeromonas salmonicida vapA type V and Vibrio spp. are predominant bacteria recovered from ballan wrasse Labrus bergylta in Scotland. Diseases of Aquatic Organisms, 140, Art. No.: 47-54. https://doi.org/10.3354/dao03489

Article

Local ancestry inference provides insight into Tilapia breeding programmes

Avallone A, Bartie KL, Selly SC, Taslima K, Campos Mendoza A & Bekaert M (2020) Local ancestry inference provides insight into Tilapia breeding programmes. Scientific Reports, 10 (1), Art. No.: 18613. https://doi.org/10.1038/s41598-020-75744-9

Article

European lobsters utilise Atlantic salmon wastes in coastal integrated multi-trophic aquaculture systems

Baltadakis A, Casserly J, Falconer L, Sprague M & Telfer TC (2020) European lobsters utilise Atlantic salmon wastes in coastal integrated multi-trophic aquaculture systems. Aquaculture Environment Interactions, 12, pp. 485-494. https://doi.org/10.3354/aei00378

Book Chapter

Molecular Diagnostics of Ebola Patient Samples by Institut Pasteur de Dakar Mobile Laboratory in Guinea 2014-2016

Faye O, Diagne CT, Diallo A, Meyer E, Soropogui B, Fall G, Fall C, Magassouba N, Koivogui L, Keita S, Loucoubar C, Diop M, Weidmann M, Faye O & Sall AA (2020) Molecular Diagnostics of Ebola Patient Samples by Institut Pasteur de Dakar Mobile Laboratory in Guinea 2014-2016. In: Okware SI (ed.) Re-emerging Filovirus Diseases. London: InTech, pp. 71-81. https://doi.org/10.5772/intechopen.88263

Article

Larva of greater wax moth Galleria mellonella is a suitable alternative host for the fish pathogen Francisella noatunensis subsp. orientalis

Djainal WAS, Shahin K, Metselaar M, Adams A & Desbois AP (2020) Larva of greater wax moth Galleria mellonella is a suitable alternative host for the fish pathogen Francisella noatunensis subsp. orientalis. BMC Microbiology, 20, Art. No.: 8. https://doi.org/10.1186/s12866-020-1695-0

Article

Reclassification of Francisella noatunensis subsp. orientalis Ottem et al. 2009 as Francisella orientalis sp. nov., Francisella noatunensis subsp. chilensis subsp. nov. and emended description of Francisella noatunensis

Ramirez-Paredes JG, Larsson P, Thompson KD, Penman DJ, Busse H, Ohrman C, Sjodin A, Soto E, Richards RH, Adams A & Colquhoun DJ (2020) Reclassification of Francisella noatunensis subsp. orientalis Ottem et al. 2009 as Francisella orientalis sp. nov., Francisella noatunensis subsp. chilensis subsp. nov. and emended description of Francisella noatunensis. International Journal of Systematic and Evolutionary Microbiology, 70 (3), p. 2034–2048. https://doi.org/10.1099/ijsem.0.004009

Article

Characterising the mechanisms underlying genetic resistance to amoebic gill disease in Atlantic salmon using RNA sequencing

Robledo D, Hamilton A, Gutiérrez AP, Bron JE & Houston RD (2020) Characterising the mechanisms underlying genetic resistance to amoebic gill disease in Atlantic salmon using RNA sequencing. BMC Genomics, 21 (1), Art. No.: 271. https://doi.org/10.1186/s12864-020-6694-x

Article

Linkages of agroecosystems producing farmed seafood on food security, nutritional status and adolescent health in Bangladesh

de Roos B, Roos N, Ara G, Ahmed T, Mamun A, Sneddon AA, Murray F, Grieve E & Little DC (2020) Linkages of agroecosystems producing farmed seafood on food security, nutritional status and adolescent health in Bangladesh. Maternal and Child Nutrition, 16 (S3), Art. No.: e13017. https://doi.org/10.1111/mcn.13017

Article

A T3SS Regulator Mutant of Vibrio alginolyticus Affects Antibiotic Susceptibilities and Provides Significant Protection to Danio rerio as a Live Attenuated Vaccine

Zhou S, Tu X, Pang H, Hoare R, Monaghan SJ, Luo J & Jian J (2020) A T3SS Regulator Mutant of Vibrio alginolyticus Affects Antibiotic Susceptibilities and Provides Significant Protection to Danio rerio as a Live Attenuated Vaccine. Frontiers in Cellular and Infection Microbiology, 10, Art. No.: 183. https://doi.org/10.3389/fcimb.2020.00183

Book Chapter

Development and Validation of Real-Time RT-LAMP Assays for the Specific Detection of Zika Virus

Lopez-Jimena B, Bakheit M, Bekaert M, Harold G, Frischmann S, Fall C, Diagne CT, Faye O, Faye O, Sall AA & Weidmann M (2020) Development and Validation of Real-Time RT-LAMP Assays for the Specific Detection of Zika Virus. In: Kobinger G & Racine T (eds.) Zika Virus: Methods and Protocols. Methods in Molecular Biology, 2142. New York: Springer, pp. 147-164. https://doi.org/10.1007/978-1-0716-0581-3_13

Book Chapter

Comparative Analysis of Zika Virus Detection by RT-qPCR, RT-LAMP, and RT-RPA

Diagne CT, Faye M, Lopez-Jimena B, Abd El Wahed A, Loucoubar C, Fall C, Mencatelli G, Faye O, Faye O, Weidmann M & Sall AA (2020) Comparative Analysis of Zika Virus Detection by RT-qPCR, RT-LAMP, and RT-RPA. In: Kobinger G & Racine T (eds.) Zika Virus: Methods and Protocols. Methods in Molecular Biology, 2142. New York: Springer, pp. 165-179. https://doi.org/10.1007/978-1-0716-0581-3_14

Article

Gender accommodative versus transformative approaches: a comparative assessment within a post-harvest fish loss reduction intervention

Cole SM, Kaminski AM, McDougall C, Kefi AS, Marinda PA, Maliko M & Mtonga J (2020) Gender accommodative versus transformative approaches: a comparative assessment within a post-harvest fish loss reduction intervention. Gender, Technology and Development, 24 (1), pp. 48-65. https://doi.org/10.1080/09718524.2020.1729480

Article

Limitations to Starch Utilization in Barramundi (Lates calcarifer) as Revealed by NMR-Based Metabolomics

Palma M, Trenkner LH, Rito J, Tavares LC, Silva E, Glencross BD, Jones JG, Wade NM & Viegas I (2020) Limitations to Starch Utilization in Barramundi (Lates calcarifer) as Revealed by NMR-Based Metabolomics. Frontiers in Physiology, 11, Art. No.: 205. https://doi.org/10.3389/fphys.2020.00205

Article

Sex determination in the GIFT strain of tilapia is controlled by a locus in linkage group 23

Taslima K, Wehner S, Taggart JB, de Verdal H, Benzie JAH, Bekaert M, McAndrew BJ & Penman DJ (2020) Sex determination in the GIFT strain of tilapia is controlled by a locus in linkage group 23. BMC Genetics, 21, Art. No.: 49. https://doi.org/10.1186/s12863-020-00853-3

Book Chapter

Zika Virus Amplification Using Strand Displacement Isothermal Method and Sequencing Using Nanopore Technology

Hansen S, Faye O, Sanabani SS, Faye M, Böhlken-Fascher S, Faye O, Sall AA, Bekaert M, Weidmann M, Czerny C & Abd El Wahed A (2020) Zika Virus Amplification Using Strand Displacement Isothermal Method and Sequencing Using Nanopore Technology. In: Kobinger G & Racin T (eds.) Zika Virus: Methods and Protocols. Methods in Molecular Biology, 2142. New York: Springer, pp. 123-136. https://doi.org/10.1007/978-1-0716-0581-3_11

Edited Book

Welfare Indicators for farmed rainbow trout: tools for assessing fish welfare

Noble C, Gismervik K, Iversen MH, Kolarevic J, Nilsson J, Stien LH & Turnbull JF (eds.) (2020) Welfare Indicators for farmed rainbow trout: tools for assessing fish welfare. Fishwell handbooks. Tromso, Norway: Nofima. https://nofima.no/en/fishwell/

Article

Polarized trout epithelial cells regulate transepithelial electrical resistance, gene expression, and the phosphoproteome in response to viral infection

Mandal SC, Weidmann M, Albalat A, Carrick E, Morro B & MacKenzie S (2020) Polarized trout epithelial cells regulate transepithelial electrical resistance, gene expression, and the phosphoproteome in response to viral infection. Frontiers in Immunology, 11, Art. No.: 1809. https://doi.org/10.3389/fimmu.2020.01809

Article

Short term cold storage and sperm concentration assessment of lumpfish (Cyclopterus lumpus. L) Milt

Pountney SM, Migaud H & Davie A (2020) Short term cold storage and sperm concentration assessment of lumpfish (Cyclopterus lumpus. L) Milt. Aquaculture, 529, Art. No.: 735646. https://doi.org/10.1016/j.aquaculture.2020.735646

Article

Comparison of local knowledge and researcher-led observations for wildlife exploitation assessment and management

Temple AJ, Stead SM, Hind-Ozan E, Jiddawi N & Berggren P (2020) Comparison of local knowledge and researcher-led observations for wildlife exploitation assessment and management. Environmental Conservation, 47 (4), pp. 304-309. https://doi.org/10.1017/S0376892920000296

Article

Production and verification of the first Atlantic salmon (Salmo salar L.) clonal lines

Hansen TJ, Penman D, Glover KA, Fraser TWK, Vågseth T, Thorsen A, Sørvik AGE & Fjelldal PG (2020) Production and verification of the first Atlantic salmon (Salmo salar L.) clonal lines. BMC Genetics, 21, Art. No.: 71. https://doi.org/10.1186/s12863-020-00878-8

Article

Variation in the nutritional composition of farmed Atlantic salmon (Salmo salar L.) fillets with emphasis on EPA and DHA contents

Sprague M, Fawcett S, Betancor M, Struthers W & Tocher D (2020) Variation in the nutritional composition of farmed Atlantic salmon (Salmo salar L.) fillets with emphasis on EPA and DHA contents. Journal of Food Composition and Analysis, 94, Art. No.: 103618. https://doi.org/10.1016/j.jfca.2020.103618

Article

A Hopeful Sea-Monster: A Very Large Homologous Recombination Event Impacting the Core Genome of the Marine Pathogen Vibrio anguillarum

Coyle NM, Bartie KL, Bayliss SC, Bekaert M, Adams A, McMillan S, Verner-Jeffreys DW, Desbois AP & Feil EJ (2020) A Hopeful Sea-Monster: A Very Large Homologous Recombination Event Impacting the Core Genome of the Marine Pathogen Vibrio anguillarum. Frontiers in Microbiology, 11, Art. No.: 1430. https://doi.org/10.3389/fmicb.2020.01430

Article

Physiological impact and comparison of mutant screening methods in piwil2 KO founder Nile tilapia produced by CRISPR/Cas9 system

Jin YH, Liao B, Migaud H & Davie A (2020) Physiological impact and comparison of mutant screening methods in piwil2 KO founder Nile tilapia produced by CRISPR/Cas9 system. Scientific Reports, 10 (1), Art. No.: 12600. https://doi.org/10.1038/s41598-020-69421-0

Article

Dietary supplementation with a specific mannan-rich yeast parietal fraction enhances the gut and skin mucosal barriers of Atlantic salmon (Salmo salar) and reduces its susceptibility to sea lice (Lepeophtheirus salmonis)

Leclercq E, Pontefract N, Rawling M, Valdenegro V, Aasum E, Andujar LV, Migaud H, Castex M & Merrifield D (2020) Dietary supplementation with a specific mannan-rich yeast parietal fraction enhances the gut and skin mucosal barriers of Atlantic salmon (Salmo salar) and reduces its susceptibility to sea lice (Lepeophtheirus salmonis). Aquaculture, 529, Art. No.: 735701. https://doi.org/10.1016/j.aquaculture.2020.735701

Article

A feed is still only as good as its ingredients: An update on the nutritional research strategies for the optimal evaluation of ingredients for aquaculture feeds

Glencross BD (2020) A feed is still only as good as its ingredients: An update on the nutritional research strategies for the optimal evaluation of ingredients for aquaculture feeds. Aquaculture Nutrition, 26 (6), pp. 1871-1883. https://doi.org/10.1111/anu.13138

Article

Ontogeny of the Osmoregulatory Capacity of Teleosts and the Role of Ionocytes

Fridman S (2020) Ontogeny of the Osmoregulatory Capacity of Teleosts and the Role of Ionocytes. Frontiers in Marine Science, 7, Art. No.: 709. https://doi.org/10.3389/fmars.2020.00709

Article

miRNAs Predicted to Regulate Host Anti-viral Gene Pathways in IPNV-Challenged Atlantic Salmon Fry Are Affected by Viral Load, and Associated With the Major IPN Resistance QTL Genotypes in Late Infection

Woldemariam NT, Agafonov O, Sindre H, Høyheim B, Houston RD, Robledo D, Bron JE & Andreassen R (2020) miRNAs Predicted to Regulate Host Anti-viral Gene Pathways in IPNV-Challenged Atlantic Salmon Fry Are Affected by Viral Load, and Associated With the Major IPN Resistance QTL Genotypes in Late Infection. Frontiers in Immunology, 11, Art. No.: 2113. https://doi.org/10.3389/fimmu.2020.02113

Article

Campylobacter pinnipediorum subsp. caledonicus and C. pinnipediorum subsp. pinnipediorum recovered from abscesses in pinnipeds

Foster G, Baily JL, Howie F, Brownlow AC, Wagenaar JA, Gilbert MJ, Miller WG, Byrne BA, Clothier KA, Schmitt T, Patterson T, Reid RJ & Dagleish MP (2020) Campylobacter pinnipediorum subsp. caledonicus and C. pinnipediorum subsp. pinnipediorum recovered from abscesses in pinnipeds. Diseases of Aquatic Organisms, 142, pp. 41-46. https://doi.org/10.3354/dao03544

Article

Bivalves are NO different: nitric oxide as negative regulator of metamorphosis in the Pacific oyster, Crassostrea gigas

Vogeler S, Carboni S, Li X, Nevejan N, Monaghan SJ, Ireland JH & Joyce A (2020) Bivalves are NO different: nitric oxide as negative regulator of metamorphosis in the Pacific oyster, Crassostrea gigas. BMC Developmental Biology, 20 (1), Art. No.: 23. https://doi.org/10.1186/s12861-020-00232-2

Article

Farming fish in the sea will not nourish the world

Belton B, Little DC, Zhang W, Edwards P, Skladany M & Thilsted SH (2020) Farming fish in the sea will not nourish the world. Nature Communications, 11, Art. No.: 5804. https://doi.org/10.1038/s41467-020-19679-9

Article

Effect of dietary oil from Camelina sativa on the growth performance, fillet fatty acid profile and gut microbiome of gilthead Sea bream (Sparus aurata)

Huyben D, Rimoldi S, Ceccotti C, Montero D, Betancor M, Iannini F & Terova G (2020) Effect of dietary oil from Camelina sativa on the growth performance, fillet fatty acid profile and gut microbiome of gilthead Sea bream (Sparus aurata). PeerJ, 8, Art. No.: e10430. https://doi.org/10.7717/peerj.10430

Article

Fish losses for whom? A gendered assessment of post-harvest losses in the barotse floodplain fishery, Zambia

Kaminski AM, Cole SM, Al Haddad RE, Kefi AS, Chilala AD, Chisule G, Mukuka KN, Longley C, Teoh SJ & Ward AR (2020) Fish losses for whom? A gendered assessment of post-harvest losses in the barotse floodplain fishery, Zambia. Sustainability, 12 (23), Art. No.: 10091. https://doi.org/10.3390/su122310091

Article

Identification of miR-145 as a Key Regulator Involved in LC-PUFA Biosynthesis by Targeting hnf4α in the Marine Teleost Siganus canaliculatus

Chen C, Zhang M, Li Y, Wang S, Xie D, Wen X, Hu Y, Shen J, He X, You C, Tocher DR & Monroig Ó (2020) Identification of miR-145 as a Key Regulator Involved in LC-PUFA Biosynthesis by Targeting hnf4α in the Marine Teleost Siganus canaliculatus. Journal of Agricultural and Food Chemistry, 68 (51), pp. 15123-15133. https://doi.org/10.1021/acs.jafc.0c04649

Article

Micronutrient supplementation affects transcriptional and epigenetic regulation of lipid metabolism in a dose-dependent manner

Saito T, Whatmore P, Taylor JF, Fernandes JMO, Adam A, Tocher DR, Espe M & Skjærven KH (2020) Micronutrient supplementation affects transcriptional and epigenetic regulation of lipid metabolism in a dose-dependent manner. Epigenetics. https://doi.org/10.1080/15592294.2020.1859867

Article

Innovation in Nucleotide-Binding Oligomerization-Like Receptor and Toll-Like Receptor Sensing Drives the Major Histocompatibility Complex-II Free Atlantic Cod Immune System

Jin X, Morro B, Tørresen OK, Moiche V, Solbakken MH, Jakobsen KS, Jentoft S & MacKenzie S (2020) Innovation in Nucleotide-Binding Oligomerization-Like Receptor and Toll-Like Receptor Sensing Drives the Major Histocompatibility Complex-II Free Atlantic Cod Immune System. Frontiers in Immunology, 11, Art. No.: 609456. https://doi.org/10.3389/fimmu.2020.609456

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